BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E12SP1|AL428409
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1556 1782 0.0
>3x_Contig1556
Length = 10874
Score = 1782 bits (899), Expect = 0.0
Identities = 899/899 (100%)
Strand = Plus / Plus
Query: 1 gaaaagattgaagaagtgcaaagggctttagagaagaaggcgggtgctaacactaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7938 gaaaagattgaagaagtgcaaagggctttagagaagaaggcgggtgctaacactaatgga 7997
Query: 61 gagtccgcggaaggcaacaacgaaatcccagcagatgctggggtaacaggagatgaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7998 gagtccgcggaaggcaacaacgaaatcccagcagatgctggggtaacaggagatgaacct 8057
Query: 121 gatacagctaatgctgttgcggcaattcctatcgagggaaatcctcaaccacaagctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8058 gatacagctaatgctgttgcggcaattcctatcgagggaaatcctcaaccacaagctgac 8117
Query: 181 ggtaatgacggtgctgtggtggagcccgaggccaatgccgaaccgcttatcgaccaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8118 ggtaatgacggtgctgtggtggagcccgaggccaatgccgaaccgcttatcgaccaggaa 8177
Query: 241 gatggtgtgacagcatcgcaggacaatccattacttaattcaaatgcagagtctcaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8178 gatggtgtgacagcatcgcaggacaatccattacttaattcaaatgcagagtctcaatta 8237
Query: 301 gaatctcaacaacctgtagaacaggtcgcagcctaatacacatactactagcattactac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8238 gaatctcaacaacctgtagaacaggtcgcagcctaatacacatactactagcattactac 8297
Query: 361 ttctatcaattatataactatggtttcataaacaacatgcttttctacgtaaaatgcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8298 ttctatcaattatataactatggtttcataaacaacatgcttttctacgtaaaatgcaac 8357
Query: 421 aaaacagtcatcgggcgatcagtcaatcagtcaataaattcattagtgacacattcaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8358 aaaacagtcatcgggcgatcagtcaatcagtcaataaattcattagtgacacattcaaca 8417
Query: 481 tcagcaagtacacaataacagattatgtgactgttccaccttacatccgtacctcaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8418 tcagcaagtacacaataacagattatgtgactgttccaccttacatccgtacctcaatgt 8477
Query: 541 attttatatatttttggaatttggttatacattattactgtttaaggtaatacacataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8478 attttatatatttttggaatttggttatacattattactgtttaaggtaatacacataaa 8537
Query: 601 ctttttcagaaaaacttacacaaggcagtccaattgtggtaaggctgggtgtcctgggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8538 ctttttcagaaaaacttacacaaggcagtccaattgtggtaaggctgggtgtcctgggca 8597
Query: 661 gacgtccccctgccgatattcctttcctctaagactgagccgttctgccagggggagctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8598 gacgtccccctgccgatattcctttcctctaagactgagccgttctgccagggggagctg 8657
Query: 721 agacacagagtctctctgtccggctttcctagtcctgcccaggaaactctccctccaggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8658 agacacagagtctctctgtccggctttcctagtcctgcccaggaaactctccctccaggc 8717
Query: 781 tggaattcagattcacagaaccaatgcctaggctgggaccagagtttctgcccagcccct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8718 tggaattcagattcacagaaccaatgcctaggctgggaccagagtttctgcccagcccct 8777
Query: 841 tcggttccagtacatggaccaattctggcaaatggtgaattttcaatattgtaggtata 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8778 tcggttccagtacatggaccaattctggcaaatggtgaattttcaatattgtaggtata 8836
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5373
Number of Sequences: 1807
Number of extensions: 5373
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)